Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
|
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
|---|---|---|---|---|---|---|---|---|---|
| THCA | rs140709316 | chr1:219584384 | C/T | 0.000192 | 478 | 15.08 | 19.73 | 12.47 | KM Plot |
| THCA | rs140714556 | chr1:220784764 | C/T | 2.55E-5 | 488 | 15.9 | 16.97 | 17.17 | KM Plot |
| THCA | rs140725799 | chr6:24431838 | C/T | 6.43E-7 | 477 | 16.33 | 14.9 | 9.25 | KM Plot |
| THCA | rs140734481 | chr4:39483788 | CAGG/C | 4.44E-15 | 489 | 15.9 | 17.63 | 6.1 | KM Plot |
| THCA | rs140779889 | chr10:104960518 | TTTG/T | 7.15E-9 | 483 | 15.33 | 17.73 | 32.1 | KM Plot |
| THCA | rs140904927 | chr6:24404852 | G/GTCC | 4.55E-15 | 490 | 16.38 | 14.8 | 11.07 | KM Plot |
| THCA | rs140937756 | chr4:1139124 | G/A | 7.2E-9 | 485 | 16.2 | 14.93 | 32.1 | KM Plot |
| THCA | rs1409812 | chr1:184031561 | A/C | 1.4E-5 | 475 | 14.93 | 17.1 | 22.4 | KM Plot |
| THCA | rs141013589 | chr1:91782229 | GA/G | 7.89E-6 | 489 | 15.63 | 17.03 | 17.77 | KM Plot |
| THCA | rs141022276 | chr10:7889947 | GA/G | 1.2E-5 | 486 | 14.93 | 16.67 | 17.77 | KM Plot |
| THCA | rs1410245 | chr1:167018637 | A/G | 7.14E-7 | 471 | 15.43 | 17.63 | 16.75 | KM Plot |
| THCA | rs141161527 | chr1:91742419 | AATT/A | 8.08E-6 | 484 | 15.83 | 17 | 17.77 | KM Plot |
| THCA | rs141161711 | chr6:79549172 | G/A | 3.92E-6 | 488 | 18.8 | 16.37 | 15.7 | KM Plot |
| THCA | rs141237808 | chr4:3230988 | CCACACACATGCCACATG/C | 7.75E-5 | 474 | 16.8 | 14.18 | 13.48 | KM Plot |
| THCA | rs141271718 | chr1:22353345 | A/AC | 8.15E-9 | 466 | 15.08 | 18.2 | 9.47 | KM Plot |